Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0310075 NimC1-RB

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Description

Nimrod C1

Gene Synonyms

NimC1

Location

Primary_assembly 2L: 13,974,119-13,976,254 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 33 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0259896 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0343644	NimC1-RC	2999	622aa	FBpp0310237	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0080615	NimC1-RA	2054	620aa	FBpp0080188	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D9IQC1 D9IQC2 D9IQC3 D9IQC9 D9IQD2 D9IQD5 H5V8G7 Q8MS81 Q9VJU5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0310075	NimC1-RB	2038	622aa	FBpp0301776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D9IQC2 M9PBB4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Protein summary

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Protein domains for FBpp0301776.

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