Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0301311 Cap-H2-RF

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Description

Chromosome associated protein H2

Gene Synonyms

Cap-H2

Location

Primary_assembly 3R: 10,761,310-10,766,756 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features and maps to 45 oligo probes.

Gene

This transcript is a product of gene FBgn0037831 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0301310	Cap-H2-RE	4015	960aa	FBpp0290525	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YU87 Q8INL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0302571	Cap-H2-RG	4012	959aa	FBpp0291727	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHE3 C7LAG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0301311	Cap-H2-RF	3976	947aa	FBpp0290526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VGX5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0082273	Cap-H2-RD	2933	699aa	FBpp0081750	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IHA6	-

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Protein summary

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Protein domains for FBpp0290526.

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