Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: FBtr0088120 sha-RA

.

Description

shavenoid

Gene Synonyms

sha

Location

Primary_assembly 2R: 11,325,788-11,336,463 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 45 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0003382 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0273343	sha-RB	6113	1633aa	FBpp0271851	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF2 D2NUF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
FBtr0088120	sha-RA	5895	1626aa	FBpp0087221	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8J5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0332463	sha-RC	5871	1618aa	FBpp0304736	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEL5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Protein summary

.

Protein domains for FBpp0087221.

.