Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: FBtr0085528 Atg16-RC

.

Description

Autophagy-related 16

Gene Synonyms

Atg16

Location

Primary_assembly 3R: 29,827,281-29,835,101 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 42 domains and features and maps to 59 oligo probes.

Gene

This transcript is a product of gene FBgn0039705 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0339144	Atg16-RF	2374	612aa	FBpp0308289	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R7 E4NKN7 H0RNK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0085528	Atg16-RC	2350	604aa	FBpp0084894	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BR6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0085530	Atg16-RB	1668	445aa	FBpp0084896	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP88 Q9VAF9	-
FBtr0085529	Atg16-RA	1659	419aa	FBpp0084895	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TJ1	-

.

Protein summary

.

Protein domains for FBpp0084894.

.