Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0082528 ClC-a-RD

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Description

Chloride channel-a

Gene Synonyms

ClC-a

Location

Primary_assembly 3R: 11,797,244-11,806,567 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 61 domains and features and maps to 45 oligo probes.

Gene

This transcript is a product of gene FBgn0051116 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0082528	ClC-a-RD	3994	1193aa	FBpp0082002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VGH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0301023	ClC-a-RH	4444	1145aa	FBpp0290245	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0082526	ClC-a-RA	4353	1176aa	FBpp0082000	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0334891	ClC-a-RI	4082	221aa	FBpp0306912	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGV4	-
FBtr0300622	ClC-a-RG	4031	1018aa	FBpp0289849	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0082527	ClC-a-RC	3972	1049aa	FBpp0082001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0113391	ClC-a-RF	3613	1066aa	FBpp0112303	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UUP0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Protein summary

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Protein domains for FBpp0082002.

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