Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0082470 HisCl1-RA

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Description

Histamine-gated chloride channel subunit 1

Gene Synonyms

HisCl1

Location

Primary_assembly 3R: 11,787,176-11,789,393 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 32 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0037950 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0082470	HisCl1-RA	1758	426aa	FBpp0081946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T9R9 Q9VGI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0082471	HisCl1-RB	1711	422aa	FBpp0089166	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WS32	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0082472	HisCl1-RC	1707	233aa	FBpp0089167	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5SUZ0 Q95T69	-
FBtr0301826	HisCl1-RD	1693	416aa	FBpp0291040	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5SUY9 E1JII9	-

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Protein summary

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Protein domains for FBpp0081946.

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