Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0079159 COX6CL-RA

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Description

Cytochrome c oxidase subunit 6C-like

Gene Synonyms

COX6CL

Location

Primary_assembly 2L: 5,817,890-5,818,443 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 12 domains and features and maps to 15 oligo probes.

Gene

This transcript is a product of gene FBgn0051644 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0342622	COX6CL-RC	489	90aa	FBpp0309557	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JD93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0079159	COX6CL-RA	480	87aa	FBpp0078790	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T970	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0342621	COX6CL-RB	474	85aa	FBpp0309556	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J713	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Protein summary

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Protein domains for FBpp0078790.

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