Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0079026 Pgant5-RA

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Description

Polypeptide N-Acetylgalactosaminyltransferase 5

Gene Synonyms

Pgant5

Location

Primary_assembly 2L: 5,072,170-5,093,592 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features and maps to 27 oligo probes.

Gene

This transcript is a product of gene FBgn0031681 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0079026	Pgant5-RA	4364	630aa	FBpp0078663	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6WV17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
FBtr0111024	Pgant5-RB	4340	630aa	FBpp0110323	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Protein summary

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Protein domains for FBpp0078663.

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