Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0078822 CtsF-RB

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Description

Cathepsin F

Gene Synonyms

CtsF

Location

Primary_assembly 3R: 5,237,651-5,251,745 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 25 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0260462 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0078823	CtsF-RA	2299	614aa	FBpp0078465	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0078822	CtsF-RB	1882	475aa	FBpp0078464	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5AEL2 H5V8F3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0303994	CtsF-RC	1425	350aa	FBpp0292963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3PK81	-

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Protein summary

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Protein domains for FBpp0078464.

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