Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0078041 Saf6-RA

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Description

SAGA factor-like TAF6

Gene Synonyms

Saf6

Location

Primary_assembly 2L: 813,314-815,950 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features and maps to 30 oligo probes.

Gene

This transcript is a product of gene FBgn0031281 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0078041	Saf6-RA	2416	717aa	FBpp0077705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPT4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0332974	Saf6-RB	2407	714aa	FBpp0305190	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAP2 M9PC25	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Protein summary

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Protein domains for FBpp0077705.

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