Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0077883 Rrp40-RA

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Description

Ribosomal RNA processing 40

Gene Synonyms

Rrp40

Location

Primary_assembly 2L: 1,728,732-1,729,575 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 13 domains and features and maps to 15 oligo probes.

Gene

This transcript is a product of gene FBgn0260648 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0345430	Rrp40-RB	1031	232aa	FBpp0311555	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPX7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0077883	Rrp40-RA	844	232aa	FBpp0077551	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPX7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Protein summary

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Protein domains for FBpp0077551.

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