Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0073232 Ctl1-RA

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Description

Choline transporter-like 1

Gene Synonyms

Ctl1

Location

Primary_assembly 3L: 4,277,962-4,281,585 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features and maps to 29 oligo probes.

Gene

This transcript is a product of gene FBgn0035523 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0073232	Ctl1-RA	2487	691aa	FBpp0073088	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZE7 U3PXB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0333566	Ctl1-RB	2472	686aa	FBpp0305743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHD2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Protein summary

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Protein domains for FBpp0073088.

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