Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
- Variant table
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- Structural variants
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Gene: CG33978 FBgn0053978

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Gene Synonyms

CG33978

Location

Primary_assembly 4: 157,575-175,639 reverse strand.

BDGP6.54:AE014135.4

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0308251	CG33978-RC	7548	2289aa	FBpp0300571	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z357 Q2PDM3 Q6IIX1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0310436	CG33978-RE	7461	2289aa	FBpp0302584	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2PDM3	-
FBtr0310435	CG33978-RD	6914	1965aa	FBpp0302583	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MLI5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0310437	CG33978-RF	6779	1951aa	FBpp0302585	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPM5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0334300	CG33978-RG	6722	1945aa	FBpp0306415	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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