Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Sox21a FBgn0036411

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Description

Sox21a

Gene Synonyms

Sox21a

Location

Primary_assembly 3L: 14,103,481-14,108,118 reverse strand.

BDGP6.54:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 3810 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0330178	Sox21a-RB	2335	407aa	FBpp0303211	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0075748	Sox21a-RA	2335	388aa	FBpp0075490	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUD1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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