Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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- Structural variants
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Gene: MTA1-like FBgn0027951

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Description

Metastasis associated 1-like

Gene Synonyms

MTA1-like

Location

Primary_assembly 3R: 5,638,655-5,648,738 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 610 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0330315	MTA1-like-RD	4167	922aa	FBpp0303347	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0290206	MTA1-like-RC	4976	853aa	FBpp0288645	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0T5 Q6AWS2	-
FBtr0078733	MTA1-like-RA	4167	880aa	FBpp0078382	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TP6 Q9U6X3 Q9VNF6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0078734	MTA1-like-RB	4059	844aa	FBpp0078383	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RR0 Q9VNF7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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