Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
- Variant table
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- Structural variants
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Gene: CG17636 FBgn0025837

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Gene Synonyms

CG17636

Location

Primary_assembly X: 124,370-126,714 reverse strand.

BDGP6.54:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 1044 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0307095	CG17636-RC	2028	585aa	FBpp0297938	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
FBtr0307094	CG17636-RB	2036	501aa	FBpp0297937	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5A7L0	-
FBtr0112921	CG17636-RA	1894	571aa	FBpp0111834	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XZS5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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