Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: prdm16 ENSXMAG00000019072

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Description

PR domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-080613-2]

Location

Primary_assembly 1: 10,798,007-11,002,258 reverse strand.

X_maculatus-5.0-male:CM008938.1

About this gene

This gene has 4 transcripts (splice variants), 80 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXMAT00000037991.1	prdm16-201	7613	1399aa	ENSXMAP00000024862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5Q207	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXMAT00000027769.1	prdm16-202	7689	1385aa	ENSXMAP00000029424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5QCR4	-
ENSXMAT00000031053.1	prdm16-203	7523	1289aa	ENSXMAP00000036734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5R064	-
ENSXMAT00000019148.2	prdm16-204	3837	1278aa	ENSXMAP00000019119.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4AXC4	-

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Summary

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