Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sox5 ENSXMAG00000006550

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Description

SRY-box transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]

Location

Primary_assembly 17: 15,075,865-15,233,178 reverse strand.

X_maculatus-5.0-male:CM008954.1

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXMAT00000033727.1	sox5-202	5869	806aa	ENSXMAP00000040291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5RED9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXMAT00000030520.1	sox5-204	6350	778aa	ENSXMAP00000037346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5R542	-
ENSXMAT00000026717.1	sox5-201	5839	759aa	ENSXMAP00000039333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5R6N0	-
ENSXMAT00000006587.2	sox5-203	5782	777aa	ENSXMAP00000006578.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M3ZWI4	-
ENSXMAT00000033526.1	sox5-205	5506	691aa	ENSXMAP00000040972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5RBA5	-

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Summary

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