Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: hla-dqa1 ENSXETG00000047702

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Description

major histocompatibility complex, class II, DQ alpha 1 [Source:Xenbase;Acc:XB-GENE-5999632]

Location

Primary_assembly 8: 72,899,290-72,993,702 forward strand.

UCB_Xtro_10.0:CM004450.2

About this gene

This gene has 5 transcripts (splice variants), 555 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000065145.3	hla-dqa1-204	1390	260aa	ENSXETP00000063010.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8Q4C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000113092.1	hla-dqa1-202	4902	232aa	ENSXETP00000117030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K9V8	-
ENSXETT00000106400.1	hla-dqa1-205	3128	245aa	ENSXETP00000108099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WGZ0	-
ENSXETT00000105395.1	hla-dqa1-201	1477	150aa	ENSXETP00000119432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803KGE7	-
ENSXETT00000064726.3	hla-dqa1-203	955	239aa	ENSXETP00000063941.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8Q3B3	-

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Summary

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