Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: col16a1 ENSXETG00000038251

Description

collagen, type XVI, alpha 1 [Source:Xenbase;Acc:XB-GENE-6460038]

Location

UCB_Xtro_10.0:CM004444.2

About this gene

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000107580.1	col16a1-201	5044	1620aa	ENSXETP00000113889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K0Q7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000123595.1	col16a1-202	4999	1605aa	ENSXETP00000111573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JU70	-
ENSXETT00000112744.1	col16a1-203	4990	1602aa	ENSXETP00000103524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803J6U4	-
ENSXETT00000109761.1	col16a1-204	4951	1589aa	ENSXETP00000110120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JQ64	-
ENSXETT00000118282.1	col16a1-205	4942	1586aa	ENSXETP00000108511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JKN0	-
ENSXETT00000088500.2	col16a1-206	4927	1581aa	ENSXETP00000081613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RLK5	-
ENSXETT00000103267.2	col16a1-207	4789	1535aa	ENSXETP00000101084.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SZP2	-

Summary