Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHTF1 ENSXETG00000031729

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Description

putative homeodomain transcription factor 1 [Source:Xenbase;Acc:XB-GENE-853450]

Location

Primary_assembly 2: 62,416,344-62,504,082 reverse strand.

UCB_Xtro_10.0:CM004444.2

About this gene

This gene has 10 transcripts (splice variants), 205 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000119244.1	PHTF1-201	2669	775aa	ENSXETP00000105809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JD32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000111405.1	PHTF1-202	2663	742aa	ENSXETP00000113226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JYW9	-
ENSXETT00000112891.1	PHTF1-203	2567	710aa	ENSXETP00000105785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JD18	-
ENSXETT00000113078.1	PHTF1-204	2507	690aa	ENSXETP00000106134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JE06	-
ENSXETT00000028876.5	PHTF1-208	2464	687aa	ENSXETP00000028876.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7D8V7	-
ENSXETT00000116386.1	PHTF1-205	2420	661aa	ENSXETP00000114774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803K365	-
ENSXETT00000107846.1	PHTF1-209	2326	641aa	ENSXETP00000113198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JYU7	-
ENSXETT00000063072.3	PHTF1-210	2304	614aa	ENSXETP00000061806.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PZF5	-
ENSXETT00000062954.3	PHTF1-206	2196	700aa	ENSXETP00000060323.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PX22	-
ENSXETT00000064178.3	PHTF1-207	1689	534aa	ENSXETP00000062665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8Q140	-

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Summary

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