Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX17 ENSXETG00000026438

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Description

SRY-box 17 alpha [Source:Xenbase;Acc:XB-GENE-484295]

Location

Primary_assembly 6: 115,156,583-115,183,883 forward strand.

UCB_Xtro_10.0:CM004448.2

About this gene

This gene has 7 transcripts (splice variants), 202 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000053697.4	SOX17-204	1635	383aa	ENSXETP00000053697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6P4A7 Q8AWH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000094902.2	SOX17-202	1473	379aa	ENSXETP00000070076.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QL55	-
ENSXETT00000102296.2	SOX17-205	1442	373aa	ENSXETP00000093720.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S662	-
ENSXETT00000073678.2	SOX17-201	1431	376aa	ENSXETP00000079666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RFK8	-
ENSXETT00000078728.2	SOX17-203	1422	379aa	ENSXETP00000075347.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R4B4	-
ENSXETT00000001541.5	SOX17-206	1392	376aa	ENSXETP00000001541.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7E406 Q8AWH2	-
ENSXETT00000017754.5	SOX17-207	1322	373aa	ENSXETP00000017754.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6L9G8 A0A6I8S662	-

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Summary

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