Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LIMCH1 ENSXETG00000021088

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Description

LIM and calponin homology domains 1 [Source:Xenbase;Acc:XB-GENE-5950305]

Location

Primary_assembly 1: 36,802,464-36,955,223 forward strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 9 transcripts (splice variants), 300 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000093512.2	LIMCH1-204	6341	1895aa	ENSXETP00000095636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SLB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000045573.5	LIMCH1-203	7795	1464aa	ENSXETP00000045573.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6ZAR4	-
ENSXETT00000091995.2	LIMCH1-205	6101	1815aa	ENSXETP00000100408.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SYF6	-
ENSXETT00000087440.2	LIMCH1-206	6074	1806aa	ENSXETP00000081642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R7R7	-
ENSXETT00000076469.2	LIMCH1-207	4394	1246aa	ENSXETP00000086966.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RPB4	-
ENSXETT00000104693.2	LIMCH1-202	4064	1109aa	ENSXETP00000075319.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R1Y8	-
ENSXETT00000072634.2	LIMCH1-201	4037	1071aa	ENSXETP00000065128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8PXE9	-
ENSXETT00000083252.2	LIMCH1-208	3980	1108aa	ENSXETP00000066759.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QB48	-
ENSXETT00000102343.2	LIMCH1-209	3854	1132aa	ENSXETP00000069433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QLJ9	-

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Summary

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