Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ythdc1 ENSXETG00000017960

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Description

YTH domain containing 1 [Source:Xenbase;Acc:XB-GENE-1004178]

Location

Primary_assembly 1: 82,571,726-82,599,775 reverse strand.

UCB_Xtro_10.0:CM004443.2

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000038938.5	ythdc1-202	3186	703aa	ENSXETP00000038938.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XU94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000098258.2	ythdc1-203	3132	685aa	ENSXETP00000072209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QV26	-
ENSXETT00000067455.2	ythdc1-204	3123	682aa	ENSXETP00000077575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QVT6	-
ENSXETT00000054717.4	ythdc1-205	3096	673aa	ENSXETP00000054717.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PXU3	-
ENSXETT00000085503.2	ythdc1-206	3042	655aa	ENSXETP00000068153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QHX0	-
ENSXETT00000085671.2	ythdc1-201	2858	671aa	ENSXETP00000089709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S948	-

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Summary

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