Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PMS1 ENSXETG00000009885

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Description

PMS1 homolog 1, mismatch repair system component [Source:Xenbase;Acc:XB-GENE-959881]

Location

Primary_assembly 9: 47,379,832-47,471,405 reverse strand.

UCB_Xtro_10.0:CM004451.2

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000074114.2	PMS1-201	5459	921aa	ENSXETP00000098467.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RPY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000077261.2	PMS1-202	5336	880aa	ENSXETP00000066534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QDA7	-
ENSXETT00000068668.2	PMS1-203	3832	921aa	ENSXETP00000094358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RPY1	-
ENSXETT00000021769.5	PMS1-204	3790	921aa	ENSXETP00000021769.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RPY1	-
ENSXETT00000108457.1	PMS1-205	2567	148aa	ENSXETP00000118953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803KFA7	-

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Summary

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