Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB1 ENSXETG00000009045

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Description

SATB homeobox 1 [Source:Xenbase;Acc:XB-GENE-854103]

Location

Primary_assembly 6: 45,016,704-45,119,210 reverse strand.

UCB_Xtro_10.0:CM004448.2

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000120623.1	SATB1-202	7181	752aa	ENSXETP00000113045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6W9E4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000112161.1	SATB1-201	6698	752aa	ENSXETP00000103239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6W9E4	-
ENSXETT00000105706.1	SATB1-203	4953	752aa	ENSXETP00000102893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6W9E4	-
ENSXETT00000019817.4	SATB1-204	4041	752aa	ENSXETP00000019817.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6W9E4	-
ENSXETT00000019819.4	SATB1-205	3534	747aa	ENSXETP00000019819.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6W9B5	-

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Summary

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