Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RFX1 ENSXETG00000005567

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Description

regulatory factor X1 [Source:Xenbase;Acc:XB-GENE-994757]

Location

Primary_assembly 3: 141,087,778-141,128,027 forward strand.

UCB_Xtro_10.0:CM004445.2

About this gene

This gene has 5 transcripts (splice variants), 257 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000012247.4	RFX1-202	4014	880aa	ENSXETP00000012247.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6WM24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000083772.2	RFX1-203	4014	880aa	ENSXETP00000098178.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SKZ4	-
ENSXETT00000094505.2	RFX1-204	3915	847aa	ENSXETP00000078615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RCF5	-
ENSXETT00000095388.2	RFX1-205	3915	847aa	ENSXETP00000069126.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QKP1	-
ENSXETT00000098786.2	RFX1-201	3698	824aa	ENSXETP00000088477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8S5G6	-

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Summary

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