Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: vps50 ENSTRUG00000015181

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Description

VPS50 subunit of EARP/GARPII complex [Source:NCBI gene;Acc:101069676]

Location

Primary_assembly 12: 11,060,486-11,108,551 reverse strand.

fTakRub1.2:LR584248.2

About this gene

This gene has 10 transcripts (splice variants), 83 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000072090.1	vps50-201	4223	995aa	ENSTRUP00000068081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000073407.1	vps50-202	4145	969aa	ENSTRUP00000066748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000087585.1	vps50-203	4136	947aa	ENSTRUP00000087383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000085492.1	vps50-204	4130	964aa	ENSTRUP00000077498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000068051.1	vps50-205	4052	938aa	ENSTRUP00000082142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000064940.1	vps50-207	3989	975aa	ENSTRUP00000083887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000072718.1	vps50-208	3956	964aa	ENSTRUP00000069993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000061510.1	vps50-209	3908	948aa	ENSTRUP00000086650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000077021.1	vps50-206	3461	722aa	ENSTRUP00000057814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000038916.3	vps50-210	2538	598aa	ENSTRUP00000038777.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2UPA6	-

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Summary

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