Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: csde1 ENSTRUG00000007996

.

Description

cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]

Location

Primary_assembly 3: 4,604,712-4,613,456 reverse strand.

fTakRub1.2:LR584237.1

About this gene

This gene has 10 transcripts (splice variants) and 240 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000069248.1	csde1-210	3514	905aa	ENSTRUP00000080673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674P4R3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000063482.1	csde1-209	3496	899aa	ENSTRUP00000066119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MXW9	-
ENSTRUT00000074046.1	csde1-208	3382	861aa	ENSTRUP00000068474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674N5B8	-
ENSTRUT00000076984.1	csde1-207	3373	858aa	ENSTRUP00000086544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674PLZ3	-
ENSTRUT00000069684.1	csde1-206	3313	872aa	ENSTRUP00000060718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MHW4	-
ENSTRUT00000059290.1	csde1-205	3214	839aa	ENSTRUP00000072152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674NG00	-
ENSTRUT00000073129.1	csde1-204	3151	818aa	ENSTRUP00000082568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674PAC9	-
ENSTRUT00000070762.1	csde1-203	2605	855aa	ENSTRUP00000068530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674N5G8	-
ENSTRUT00000082301.1	csde1-202	2542	834aa	ENSTRUP00000060437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MG50	-
ENSTRUT00000019986.3	csde1-201	2272	744aa	ENSTRUP00000019905.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2T5G6	-

.

Summary

.

.