Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cdx1a ENSTRUG00000007928

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Description

caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]

Location

Primary_assembly 14: 6,309,998-6,312,519 reverse strand.

fTakRub1.2:LR584244.1

About this gene

This gene has 2 transcripts (splice variants), 105 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000089790.1	cdx1a-201	681	226aa	ENSTRUP00000078962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674P1K8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000019827.3	cdx1a-202	420	139aa	ENSTRUP00000019747.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2T509	-

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Summary

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