Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: hoxc5a ENSTRUG00000003635

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Description

homeobox C5a [Source:ZFIN;Acc:ZDB-GENE-980526-533]

Location

Primary_assembly 3: 10,348,158-10,350,967 forward strand.

fTakRub1.2:LR584237.1

About this gene

This gene has 3 transcripts (splice variants), 179 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000008569.3	hoxc5a-202	1336	217aa	ENSTRUP00000008518.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I6L6X7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000074601.1	hoxc5a-201	1820	206aa	ENSTRUP00000062029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674MM21	-
ENSTRUT00000060492.1	hoxc5a-203	1306	207aa	ENSTRUP00000084922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A674PGR5	-

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Summary

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