Transcript: ENSTNIT00000005432.1 col6a4a-202

Description

collagen, type VI, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-041111-303]

Location

About this transcript

This transcript has 44 exons, is annotated with 78 domains and features and is associated with 75 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTNIT00000005432.1	col6a4a-202	7308	2436aa	ENSTNIP00000005286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3CAL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTNIT00000005430.1	col6a4a-201	6540	2180aa	ENSTNIP00000005284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3CAL2	-
ENSTNIT00000004860.1	col6a4a-203	3915	1305aa	ENSTNIP00000004716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3C8Z4	-
ENSTNIT00000005431.1	col6a4a-204	2868	956aa	ENSTNIP00000005285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3CAL3	-

Summary

Statistics

Exons: 44, Coding exons: 44, Transcript length: 7,308 bps, Translation length: 2,436 residues

Version

ENSTNIT00000005432.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 1, 4.