Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL18A1 ENSTGUG00000003295

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Description

collagen type XVIII alpha 1 chain [Source:NCBI gene;Acc:100229732]

Location

Primary_assembly 7: 2,034,331-2,072,227 forward strand.

bTaeGut1_v1.p:CM012089.1

About this gene

This gene has 5 transcripts (splice variants), 177 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTGUT00000039837.1	COL18A1-203	6084	1685aa	ENSTGUP00000024291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTGUT00000026179.1	COL18A1-204	6037	1667aa	ENSTGUP00000031686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTGUT00000045433.1	COL18A1-201	5722	1468aa	ENSTGUP00000028991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTGUT00000003445.2	COL18A1-205	5461	1443aa	ENSTGUP00000003411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YYN3	-
ENSTGUT00000030205.1	COL18A1-202	4882	1312aa	ENSTGUP00000029976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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