Transcript: ENST00000697200.1 PRAMEF7-202

Description

PRAME family member 7 [Source:HGNC Symbol;Acc:HGNC:28415]

Location

Chromosome 1: 12,916,610-12,920,751 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 1573 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000204510.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000697200.1	PRAMEF7-202	1866	474aa	ENSP00000513184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30593	Q5VXH5	NM_001012277.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000330881.6	PRAMEF7-201	1560	474aa	ENSP00000328915.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30593	Q5VXH5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,866 bps, Translation length: 474 residues

MANE

This MANE Select transcript contains ENSP00000513184 and matches to NM_001012277.5 and NP_001012277.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VXH5

CCDS

This transcript is a member of the Human CCDS set: CCDS30593

Version

ENST00000697200.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000697200.1 PRAMEF7-202

Summary

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Transcript: ENST00000697200.1 PRAMEF7-202

Summary

About Us

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