Transcript: ENST00000682009.1 IFNAR2-IL10RB-204

Description

IFNAR2-IL10RB readthrough [Source:NCBI gene (formerly Entrezgene);Acc:127882475]

Location

Chromosome 21: 33,229,918-33,297,160 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 1 domain and feature, is associated with 30218 variant alleles and maps to 758 oligo probes.

Gene

This transcript is a product of gene ENSG00000249624.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000433395.7	IFNAR2-IL10RB-202	2112	545aa	ENSP00000388223.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y3Z8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000683116.1	IFNAR2-IL10RB-205	3943	515aa	ENSP00000508125.1	Nonsense mediated decay	CCDS13621	-	-	-
ENST00000646150.1	IFNAR2-IL10RB-203	3770	515aa	ENSP00000496248.1	Nonsense mediated decay	CCDS13621	-	-	-
ENST00000682009.1	IFNAR2-IL10RB-204	2941	237aa	ENSP00000506919.1	Nonsense mediated decay		A0A804HI63	-	-
ENST00000432231.1	IFNAR2-IL10RB-201	753	112aa	ENSP00000413946.1	Nonsense mediated decay		H7C3V1	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 7, Transcript length: 2,941 bps, Translation length: 237 residues

Version

ENST00000682009.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000682009.1 IFNAR2-IL10RB-204

Summary

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Transcript: ENST00000682009.1 IFNAR2-IL10RB-204

Summary

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