Human (GRCh38.p14)
Description

sodium voltage-gated channel alpha subunit 11 [Source:HGNC Symbol;Acc:HGNC:10583]

Gene Synonyms

NAN, NAV1.9, SCN12A, SNS-2

Location
About this transcript

This transcript has 27 exons, is associated with 44461 variant alleles and maps to 712 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000302328.9SCN11A-20167931791aaENSP00000307599.3
 
Protein coding
CCDS33737Q9UI33-1 NM_001349253.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000668754.1SCN11A-20572851791aaENSP00000499569.1
 
Protein coding
CCDS33737Q9UI33-1 -GENCODE basicAPPRIS ALT2
ENST00000444237.2SCN11A-20257291444aaENSP00000408028.2
 
Protein coding
Q9UI33-2 -GENCODE basicTSL:5
ENST00000456224.7SCN11A-20352621753aaENSP00000416757.3
 
Protein coding
Q9UI33-3 -GENCODE basicAPPRIS P4TSL:5
ENST00000675892.1SCN11A-21151961731aaENSP00000502318.1
 
Protein coding
A0A6Q8PGN4 -GENCODE basic
ENST00000676176.1SCN11A-21349951664aaENSP00000501891.1
 
Protein coding
A0A6Q8PFM8 -GENCODE basic
ENST00000675223.1SCN11A-20854551444aaENSP00000502481.1
 
Nonsense mediated decay
A0A6Q8PGY3 --
ENST00000675672.1SCN11A-2105430960aaENSP00000502446.1
 
Nonsense mediated decay
A0A6Q8PGY6 --
ENST00000676045.1SCN11A-2125420108aaENSP00000501685.1
 
Nonsense mediated decay
A0A6Q8PF78 --
ENST00000675269.1SCN11A-2091188No protein-
 
Protein coding CDS not defined
---
ENST00000674979.1SCN11A-207560No protein-
 
Protein coding CDS not defined
---
ENST00000676333.1SCN11A-214481No protein-
 
Protein coding CDS not defined
---
ENST00000665106.1SCN11A-2042614No protein-
 
Retained intron
---
ENST00000674755.1SCN11A-206688No protein-
 
Retained intron
---
Statistics

Exons: 27, Coding exons: 26, Transcript length: 5,455 bps, Translation length: 1,444 residues

Version

ENST00000675223.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]