Transcript: ENST00000674724.1 LASTR-207

Description

lncRNA associated with SART3 regulation of splicing [Source:HGNC Symbol;Acc:HGNC:54143]

Gene Synonyms

LINC02657

Location

Chromosome 10: 5,594,984-5,606,967 reverse strand.

About this transcript

This transcript has 3 exons and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSG00000242147.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000675199.1	LASTR-210	829	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000676438.1	LASTR-219	1408	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000675383.1	LASTR-211	1266	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000830404.1	LASTR-220	1171	No protein	-	lncRNA	-	-
ENST00000675934.2	LASTR-214	1162	No protein	-	lncRNA	-	-
ENST00000830420.1	LASTR-236	1161	No protein	-	lncRNA	-	-
ENST00000830406.1	LASTR-222	1123	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000674724.1	LASTR-207	1109	No protein	-	lncRNA	-	-
ENST00000675960.1	LASTR-215	1105	No protein	-	lncRNA	-	-
ENST00000676326.2	LASTR-218	1074	No protein	-	lncRNA	-	-
ENST00000656119.2	LASTR-204	1060	No protein	-	lncRNA	-	-
ENST00000830421.1	LASTR-237	1047	No protein	-	lncRNA	-	-
ENST00000676219.2	LASTR-217	1042	No protein	-	lncRNA	-	-
ENST00000830418.1	LASTR-234	1042	No protein	-	lncRNA	-	-
ENST00000830407.1	LASTR-223	1006	No protein	-	lncRNA	-	-
ENST00000427341.3	LASTR-202	978	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000674735.1	LASTR-208	946	No protein	-	lncRNA	-	-
ENST00000830413.1	LASTR-229	943	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000830415.1	LASTR-231	904	No protein	-	lncRNA	-	-
ENST00000830423.1	LASTR-239	904	No protein	-	lncRNA	-	-
ENST00000660276.1	LASTR-205	892	No protein	-	lncRNA	-	-
ENST00000674838.1	LASTR-209	866	No protein	-	lncRNA	-	-
ENST00000830405.1	LASTR-221	866	No protein	-	lncRNA	-	-
ENST00000830422.1	LASTR-238	861	No protein	-	lncRNA	-	-
ENST00000830419.1	LASTR-235	849	No protein	-	lncRNA	-	-
ENST00000665493.1	LASTR-206	822	No protein	-	lncRNA	-	-
ENST00000830410.1	LASTR-226	820	No protein	-	lncRNA	-	-
ENST00000830408.1	LASTR-224	818	No protein	-	lncRNA	-	-
ENST00000675480.1	LASTR-212	816	No protein	-	lncRNA	-	-
ENST00000830414.1	LASTR-230	804	No protein	-	lncRNA	-	-
ENST00000830411.1	LASTR-227	789	No protein	-	lncRNA	-	-
ENST00000830424.1	LASTR-240	785	No protein	-	lncRNA	-	-
ENST00000830417.1	LASTR-233	773	No protein	-	lncRNA	-	-
ENST00000478294.3	LASTR-203	772	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000830416.1	LASTR-232	770	No protein	-	lncRNA	-	-
ENST00000425246.2	LASTR-201	739	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000830409.1	LASTR-225	564	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000675696.2	LASTR-213	562	No protein	-	lncRNA	-	-
ENST00000676006.1	LASTR-216	479	No protein	-	lncRNA	-	-
ENST00000830412.1	LASTR-228	436	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,109 bps,

Version

ENST00000674724.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENST00000674724.1 LASTR-207

Summary

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Transcript: ENST00000674724.1 LASTR-207

Summary

About Us

Get help

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