Transcript: ENST00000673093.1 RBP5-209

Description

retinol binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15847]

Gene Synonyms

CRBP-III, CRBP3, CRBPIII

Location

Scaffold HG1398_PATCH: 51,372-56,575 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 17 domains and features, is associated with 2230 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSG00000288369.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000673093.1	RBP5-209	957	135aa	ENSP00000500050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P82980	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000673292.1	RBP5-211	564	97aa	ENSP00000500221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4J233	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000673383.1	RBP5-212	515	69aa	ENSP00000500251.1	Nonsense mediated decay	F5H2Q2	-	-
ENST00000673031.1	RBP5-208	2461	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000673202.1	RBP5-210	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 957 bps, Translation length: 135 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P82980

Version

ENST00000673093.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000673093.1 RBP5-209

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Transcript: ENST00000673093.1 RBP5-209

Summary

About Us

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