Transcript: ENST00000672712.1 SAA1-208

Description

serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513]

Gene Synonyms

PIG4, SAA, TP53I4

Location

Scaffold HG2111_PATCH: 15,090-18,803 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features, is associated with 1802 variant alleles and maps to 398 oligo probes.

Gene

This transcript is a product of gene ENSG00000288411.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000672712.1	SAA1-208	675	122aa	ENSP00000500639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P0DJI8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000672418.1	SAA1-206	583	122aa	ENSP00000500630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P0DJI8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000673521.1	SAA1-209	547	77aa	ENSP00000499879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B3ISW8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000672662.1	SAA1-207	518	122aa	ENSP00000500281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P0DJI8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 675 bps, Translation length: 122 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0DJI8

Version

ENST00000672712.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000672712.1 SAA1-208

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Transcript: ENST00000672712.1 SAA1-208

Summary

About Us

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