Transcript: ENST00000672066.1 FAM20C-210

Description

FAM20C golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]

Gene Synonyms

DKFZP547D065, DMP4, G-CK, IMAGE:4942737

Location

Scaffold HG1309_PATCH: 168,259-235,989 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 40038 variant alleles and maps to 379 oligo probes.

Gene

This transcript is a product of gene ENSG00000288499.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000672066.1	FAM20C-210	3176	584aa	ENSP00000499851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IXL6-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000672298.1	FAM20C-211	554	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000673544.1	FAM20C-213	344	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000672379.1	FAM20C-212	2177	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000673583.1	FAM20C-214	1018	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,176 bps, Translation length: 584 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXL6

Version

ENST00000672066.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000672066.1 FAM20C-210

Summary

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Transcript: ENST00000672066.1 FAM20C-210

Summary

About Us

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