Transcript: ENST00000672029.1 H19-249

Description

H19 imprinted maternally expressed transcript [Source:HGNC Symbol;Acc:HGNC:4713]

Gene Synonyms

ASM, ASM1, D11S813E, LINC00008, MIR675HG, NCRNA00008

Location

Scaffold HG28_PATCH: 187,952-193,992 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1912 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000288237.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000672769.1	H19-254	1771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000672543.1	H19-253	944	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000672299.1	H19-251	861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000672029.1	H19-249	989	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000672067.1	H19-250	2348	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000673194.1	H19-256	2281	No protein	-	lncRNA	-	-
ENST00000673432.1	H19-258	1929	No protein	-	lncRNA	-	-
ENST00000672481.1	H19-252	1090	No protein	-	lncRNA	-	-
ENST00000673351.1	H19-257	798	No protein	-	lncRNA	-	-
ENST00000671693.1	H19-247	592	No protein	-	lncRNA	-	-
ENST00000671958.1	H19-248	554	No protein	-	lncRNA	-	-
ENST00000672919.1	H19-255	475	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 989 bps,

Version

ENST00000672029.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000672029.1 H19-249

Summary

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Transcript: ENST00000672029.1 H19-249

Summary

About Us

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