Transcript: ENST00000671980.1

Description

golgin A6 family like 2

Location

Scaffold HG2365_PATCH: 4,384,966-4,393,338 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 4934 variant alleles and maps to 403 oligo probes.

Gene

This transcript is a product of gene ENSG00000288517.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000671980.1	-	1242	414aa	ENSP00000499861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AAG2TVJ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000672648.1	-	1242	414aa	ENSP00000500253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AAG2TVJ1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,242 bps, Translation length: 414 residues

Version

ENST00000671980.1

Type

Protein coding

Annotation Method

Annotation produced by aligning human cDNA sequences to the genome using Exonerate's cdna2genome model, which utilises annotation identifying the coding regions of the cDNA sequences, along with protein evidence from UniProtKB, from various species, aligned to the genome using GeneWise. This annotation is used where there is no manual annotation and annotation could not be projected from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000671980.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000671980.1

Summary

About Us

Get help

Our sister sites

Follow us