Transcript: ENST00000671703.3 CASP8AP2-207

Description

caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]

Gene Synonyms

CED-4, FLASH, FLJ11208, KIAA1315, RIP25

Location

Scaffold HG2121_PATCH: 25,225-72,124 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 47 domains and features, is associated with 19863 variant alleles and maps to 458 oligo probes.

Gene

This transcript is a product of gene ENSG00000288475.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000671703.3	CASP8AP2-207	6792	1982aa	ENSP00000518371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UKL3	NM_001137667.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000713552.1	CASP8AP2-210	6772	1982aa	ENSP00000518847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UKL3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000673411.2	CASP8AP2-209	1353	190aa	ENSP00000518372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAG2UWT9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671875.1	CASP8AP2-208	2003	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 6,792 bps, Translation length: 1,982 residues

MANE

This MANE Select transcript contains ENSP00000518371 and matches to NM_001137667.2 and NP_001131139.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKL3

Version

ENST00000671703.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000671703.3 CASP8AP2-207

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000671703.3 CASP8AP2-207

Summary

About Us

Get help

Our sister sites

Follow us