Transcript: ENST00000671534.1 LINC00305-216

Description

long intergenic non-protein coding RNA 305 [Source:HGNC Symbol;Acc:HGNC:28597]

Gene Synonyms

C18ORF20, HST1235, MGC39571, NCRNA00305

Location

Chromosome 18: 64,080,007-64,149,088 reverse strand.

About this transcript

This transcript has 6 exons and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSG00000179676.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000669361.2	LINC00305-214	1253	No protein	-	lncRNA	NR_190189.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668958.2	LINC00305-213	1414	No protein	-	lncRNA	-	-
ENST00000718130.1	LINC00305-218	1349	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657385.1	LINC00305-204	1340	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671534.1	LINC00305-216	1333	No protein	-	lncRNA	-	-
ENST00000718141.1	LINC00305-229	1332	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718140.1	LINC00305-228	1220	No protein	-	lncRNA	-	-
ENST00000718135.1	LINC00305-223	1205	No protein	-	lncRNA	-	-
ENST00000658718.1	LINC00305-206	1087	No protein	-	lncRNA	-	-
ENST00000718137.1	LINC00305-225	1008	No protein	-	lncRNA	-	-
ENST00000718134.1	LINC00305-222	1006	No protein	-	lncRNA	-	-
ENST00000718139.1	LINC00305-227	972	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657912.1	LINC00305-205	969	No protein	-	lncRNA	-	-
ENST00000666468.1	LINC00305-212	954	No protein	-	lncRNA	-	-
ENST00000718133.1	LINC00305-221	915	No protein	-	lncRNA	-	-
ENST00000659895.1	LINC00305-207	890	No protein	-	lncRNA	-	-
ENST00000323355.3	LINC00305-201	873	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000718129.1	LINC00305-217	849	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663021.1	LINC00305-209	837	No protein	-	lncRNA	-	-
ENST00000718132.1	LINC00305-220	818	No protein	-	lncRNA	-	-
ENST00000665443.1	LINC00305-210	812	No protein	-	lncRNA	-	-
ENST00000665461.1	LINC00305-211	796	No protein	-	lncRNA	-	-
ENST00000456505.2	LINC00305-203	756	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000718138.1	LINC00305-226	746	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718136.1	LINC00305-224	743	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662600.1	LINC00305-208	713	No protein	-	lncRNA	-	-
ENST00000844917.1	LINC00305-231	695	No protein	-	lncRNA	-	-
ENST00000844916.1	LINC00305-230	683	No protein	-	lncRNA	-	-
ENST00000718131.1	LINC00305-219	628	No protein	-	lncRNA	-	-
ENST00000844918.1	LINC00305-232	627	No protein	-	lncRNA	-	-
ENST00000669878.1	LINC00305-215	559	No protein	-	lncRNA	-	-
ENST00000454647.1	LINC00305-202	339	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,333 bps,

Version

ENST00000671534.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000671534.1 LINC00305-216

Summary

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Transcript: ENST00000671534.1 LINC00305-216

Summary

About Us

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