Transcript: ENST00000671271.1 LINC01029-216

Description

long intergenic non-protein coding RNA 1029 [Source:HGNC Symbol;Acc:HGNC:49015]

Location

Chromosome 18: 77,971,277-77,993,722 reverse strand.

About this transcript

This transcript has 4 exons and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSG00000265843.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000819455.1	LINC01029-219	805	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000657337.1	LINC01029-207	2052	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671271.1	LINC01029-216	2014	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669341.1	LINC01029-215	1972	No protein	-	lncRNA	-	-
ENST00000667842.1	LINC01029-213	1813	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662109.1	LINC01029-210	1598	No protein	-	lncRNA	-	-
ENST00000583106.1	LINC01029-205	1465	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000666771.1	LINC01029-212	1432	No protein	-	lncRNA	-	-
ENST00000661306.1	LINC01029-208	1412	No protein	-	lncRNA	-	-
ENST00000656930.2	LINC01029-206	1364	No protein	-	lncRNA	-	-
ENST00000662598.1	LINC01029-211	1341	No protein	-	lncRNA	-	-
ENST00000668585.1	LINC01029-214	1336	No protein	-	lncRNA	-	-
ENST00000662085.1	LINC01029-209	1315	No protein	-	lncRNA	-	-
ENST00000577408.1	LINC01029-201	1249	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000715884.1	LINC01029-217	1164	No protein	-	lncRNA	-	-
ENST00000582805.1	LINC01029-204	788	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000579480.1	LINC01029-203	788	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000819458.1	LINC01029-222	741	No protein	-	lncRNA	-	-
ENST00000819465.1	LINC01029-229	718	No protein	-	lncRNA	-	-
ENST00000578833.4	LINC01029-202	580	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000819464.1	LINC01029-228	537	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819460.1	LINC01029-224	449	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819462.1	LINC01029-226	446	No protein	-	lncRNA	-	-
ENST00000819466.1	LINC01029-230	437	No protein	-	lncRNA	-	-
ENST00000715885.1	LINC01029-218	434	No protein	-	lncRNA	-	-
ENST00000819463.1	LINC01029-227	408	No protein	-	lncRNA	-	-
ENST00000819456.1	LINC01029-220	389	No protein	-	lncRNA	-	-
ENST00000819459.1	LINC01029-223	349	No protein	-	lncRNA	-	-
ENST00000819457.1	LINC01029-221	337	No protein	-	lncRNA	-	-
ENST00000819461.1	LINC01029-225	331	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,014 bps,

Version

ENST00000671271.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000671271.1 LINC01029-216

Summary

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Transcript: ENST00000671271.1 LINC01029-216

Summary

About Us

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