Transcript: ENST00000671006.3 LINC00670-205

Description

long intergenic non-protein coding RNA 670 [Source:HGNC Symbol;Acc:HGNC:44338]

Gene Synonyms

CARDINAL, FLJ34690

Location

Chromosome 17: 12,549,967-12,632,563 forward strand.

About this transcript

This transcript has 4 exons and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000179136.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000722108.1	LINC00670-209	1399	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000313495.7	LINC00670-201	2954	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000671006.3	LINC00670-205	2271	No protein	-	lncRNA	-	-
ENST00000698418.1	LINC00670-207	1318	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000577863.2	LINC00670-203	1260	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000577679.1	LINC00670-202	1187	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000660226.2	LINC00670-204	1126	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722119.1	LINC00670-219	1086	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000698417.2	LINC00670-206	1056	No protein	-	lncRNA	-	-
ENST00000698419.2	LINC00670-208	962	No protein	-	lncRNA	-	-
ENST00000722117.1	LINC00670-217	959	No protein	-	lncRNA	-	-
ENST00000722110.1	LINC00670-210	939	No protein	-	lncRNA	-	-
ENST00000722116.1	LINC00670-216	894	No protein	-	lncRNA	-	-
ENST00000722114.1	LINC00670-214	872	No protein	-	lncRNA	-	-
ENST00000722118.1	LINC00670-218	825	No protein	-	lncRNA	-	-
ENST00000722112.1	LINC00670-212	783	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722115.1	LINC00670-215	742	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722113.1	LINC00670-213	737	No protein	-	lncRNA	-	-
ENST00000722111.1	LINC00670-211	703	No protein	-	lncRNA	-	-
ENST00000722120.1	LINC00670-220	422	No protein	-	lncRNA	-	-
ENST00000722121.1	LINC00670-221	234	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,271 bps,

Version

ENST00000671006.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000671006.3 LINC00670-205

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Transcript: ENST00000671006.3 LINC00670-205

Summary

About Us

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