Transcript: ENST00000670794.1 LINC02235-212

Description

long intergenic non-protein coding RNA 2235 [Source:HGNC Symbol;Acc:HGNC:53106]

Gene Synonyms

RP11-354A14.1

Location

Chromosome 8: 81,841,952-81,924,346 forward strand.

About this transcript

This transcript has 3 exons, is associated with 34921 variant alleles and maps to 71 oligo probes.

Gene

This transcript is a product of gene ENSG00000254689.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000670794.1	LINC02235-212	1823	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000656073.1	LINC02235-204	2581	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000647805.1	LINC02235-202	1279	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668607.1	LINC02235-211	967	No protein	-	lncRNA	-	-
ENST00000658926.1	LINC02235-205	890	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660458.1	LINC02235-206	750	No protein	-	lncRNA	-	-
ENST00000664711.1	LINC02235-210	750	No protein	-	lncRNA	-	-
ENST00000655672.1	LINC02235-203	708	No protein	-	lncRNA	-	-
ENST00000671467.1	LINC02235-213	688	No protein	-	lncRNA	-	-
ENST00000726076.1	LINC02235-217	646	No protein	-	lncRNA	-	-
ENST00000726077.1	LINC02235-218	600	No protein	-	lncRNA	-	-
ENST00000660951.1	LINC02235-207	579	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661297.1	LINC02235-208	563	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000726074.1	LINC02235-215	530	No protein	-	lncRNA	-	-
ENST00000663542.1	LINC02235-209	508	No protein	-	lncRNA	-	-
ENST00000726073.1	LINC02235-214	480	No protein	-	lncRNA	-	-
ENST00000726075.1	LINC02235-216	475	No protein	-	lncRNA	-	-
ENST00000534675.1	LINC02235-201	466	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,823 bps,

Version

ENST00000670794.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000670794.1 LINC02235-212

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Transcript: ENST00000670794.1 LINC02235-212

Summary

About Us

Get help

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