Transcript: ENST00000670078.1 LINC00690-217

Description

long intergenic non-protein coding RNA 690 [Source:HGNC Symbol;Acc:HGNC:44503]

Location

Chromosome 3: 16,536,343-16,541,014 forward strand.

About this transcript

This transcript has 4 exons and maps to 248 oligo probes.

Gene

This transcript is a product of gene ENSG00000233570.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000661221.1	LINC00690-210	1539	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000664830.1	LINC00690-213	1966	No protein	-	lncRNA	-	-
ENST00000660669.1	LINC00690-208	1943	No protein	-	lncRNA	-	-
ENST00000669122.1	LINC00690-215	1549	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660612.1	LINC00690-207	1367	No protein	-	lncRNA	-	-
ENST00000429949.2	LINC00690-201	1364	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000656250.1	LINC00690-204	1270	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655456.1	LINC00690-203	1198	No protein	-	lncRNA	-	-
ENST00000660552.1	LINC00690-206	1193	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661146.1	LINC00690-209	1107	No protein	-	lncRNA	-	-
ENST00000659804.1	LINC00690-205	1042	No protein	-	lncRNA	-	-
ENST00000670078.1	LINC00690-217	1035	No protein	-	lncRNA	-	-
ENST00000669844.1	LINC00690-216	1015	No protein	-	lncRNA	-	-
ENST00000788176.1	LINC00690-220	956	No protein	-	lncRNA	-	-
ENST00000663672.1	LINC00690-212	954	No protein	-	lncRNA	-	-
ENST00000788175.1	LINC00690-219	945	No protein	-	lncRNA	-	-
ENST00000663006.1	LINC00690-211	902	No protein	-	lncRNA	-	-
ENST00000788177.1	LINC00690-221	709	No protein	-	lncRNA	-	-
ENST00000667160.1	LINC00690-214	629	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788174.1	LINC00690-218	561	No protein	-	lncRNA	-	-
ENST00000788178.1	LINC00690-222	492	No protein	-	lncRNA	-	-
ENST00000596963.1	LINC00690-202	445	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,035 bps,

Version

ENST00000670078.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000670078.1 LINC00690-217

Summary

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Transcript: ENST00000670078.1 LINC00690-217

Summary

About Us

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