Transcript: ENST00000670052.2 LINC02232-208

Description

long intergenic non-protein coding RNA 2232 [Source:HGNC Symbol;Acc:HGNC:53103]

Gene Synonyms

RP11-707A18.1

Location

Chromosome 4: 64,936,864-65,024,470 reverse strand.

About this transcript

This transcript has 5 exons and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSG00000250125.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000701625.2	LINC02232-213	666	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000509932.2	LINC02232-201	4460	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000659694.1	LINC02232-204	3690	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670052.2	LINC02232-208	1581	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773887.1	LINC02232-244	1493	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657399.1	LINC02232-203	1468	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773888.1	LINC02232-245	1415	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652257.1	LINC02232-202	1132	No protein	-	lncRNA	-	-
ENST00000667167.2	LINC02232-207	1076	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773882.1	LINC02232-239	1064	No protein	-	lncRNA	-	-
ENST00000665528.1	LINC02232-206	1053	No protein	-	lncRNA	-	-
ENST00000773875.1	LINC02232-232	1048	No protein	-	lncRNA	-	-
ENST00000701324.2	LINC02232-212	1005	No protein	-	lncRNA	-	-
ENST00000773868.1	LINC02232-225	968	No protein	-	lncRNA	-	-
ENST00000773886.1	LINC02232-243	958	No protein	-	lncRNA	-	-
ENST00000773874.1	LINC02232-231	932	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773873.1	LINC02232-230	910	No protein	-	lncRNA	-	-
ENST00000702068.1	LINC02232-216	902	No protein	-	lncRNA	-	-
ENST00000773872.1	LINC02232-229	898	No protein	-	lncRNA	-	-
ENST00000773871.1	LINC02232-228	870	No protein	-	lncRNA	-	-
ENST00000701180.2	LINC02232-211	855	No protein	-	lncRNA	-	-
ENST00000773867.1	LINC02232-224	818	No protein	-	lncRNA	-	-
ENST00000665259.2	LINC02232-205	812	No protein	-	lncRNA	-	-
ENST00000773878.1	LINC02232-235	799	No protein	-	lncRNA	-	-
ENST00000773889.1	LINC02232-246	792	No protein	-	lncRNA	-	-
ENST00000773866.1	LINC02232-223	788	No protein	-	lncRNA	-	-
ENST00000773864.1	LINC02232-221	781	No protein	-	lncRNA	-	-
ENST00000773865.1	LINC02232-222	774	No protein	-	lncRNA	-	-
ENST00000773870.1	LINC02232-227	771	No protein	-	lncRNA	-	-
ENST00000773879.1	LINC02232-236	743	No protein	-	lncRNA	-	-
ENST00000773863.1	LINC02232-220	715	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000773869.1	LINC02232-226	714	No protein	-	lncRNA	-	-
ENST00000773877.1	LINC02232-234	691	No protein	-	lncRNA	-	-
ENST00000773862.1	LINC02232-219	687	No protein	-	lncRNA	-	-
ENST00000700907.2	LINC02232-209	664	No protein	-	lncRNA	-	-
ENST00000773881.1	LINC02232-238	662	No protein	-	lncRNA	-	-
ENST00000701056.2	LINC02232-210	635	No protein	-	lncRNA	-	-
ENST00000773876.1	LINC02232-233	599	No protein	-	lncRNA	-	-
ENST00000701711.2	LINC02232-214	587	No protein	-	lncRNA	-	-
ENST00000773884.1	LINC02232-241	577	No protein	-	lncRNA	-	-
ENST00000773885.1	LINC02232-242	556	No protein	-	lncRNA	-	-
ENST00000773861.1	LINC02232-218	543	No protein	-	lncRNA	-	-
ENST00000773860.1	LINC02232-217	492	No protein	-	lncRNA	-	-
ENST00000701946.1	LINC02232-215	464	No protein	-	lncRNA	-	-
ENST00000773883.1	LINC02232-240	394	No protein	-	lncRNA	-	-
ENST00000773880.1	LINC02232-237	381	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,581 bps,

Version

ENST00000670052.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000670052.2 LINC02232-208

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000670052.2 LINC02232-208

Summary

About Us

Get help

Our sister sites

Follow us