Transcript: ENST00000669747.1 FAM27C-224

Description

family with sequence similarity 27 member C [Source:HGNC Symbol;Acc:HGNC:23668]

Gene Synonyms

BA374M1.5, BA7G23.5, FAM27A, FAM27A1, FAM27A3

Location

Chromosome 9: 61,856,573-61,974,053 forward strand.

About this transcript

This transcript has 4 exons and maps to 404 oligo probes.

Gene

This transcript is a product of gene ENSG00000231527.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000612999.2	FAM27C-207	1953	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000650759.1	FAM27C-208	2104	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671566.1	FAM27C-227	3444	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651393.1	FAM27C-210	2872	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653988.1	FAM27C-214	2845	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653460.1	FAM27C-213	2727	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651799.1	FAM27C-211	2691	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669872.1	FAM27C-225	2665	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669747.1	FAM27C-224	2379	No protein	-	lncRNA	-	-
ENST00000668789.2	FAM27C-223	2344	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659299.1	FAM27C-220	2344	No protein	-	lncRNA	-	-
ENST00000660875.2	FAM27C-221	2129	No protein	-	lncRNA	-	-
ENST00000655025.1	FAM27C-215	2113	No protein	-	lncRNA	-	-
ENST00000655049.1	FAM27C-216	1659	No protein	-	lncRNA	-	-
ENST00000656580.2	FAM27C-217	1594	No protein	-	lncRNA	-	-
ENST00000653087.1	FAM27C-212	1481	No protein	-	lncRNA	-	-
ENST00000443347.6	FAM27C-206	1402	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000722361.1	FAM27C-233	1395	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656926.1	FAM27C-218	1392	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722358.1	FAM27C-230	1308	No protein	-	lncRNA	-	-
ENST00000722359.1	FAM27C-231	1292	No protein	-	lncRNA	-	-
ENST00000722382.1	FAM27C-254	1290	No protein	-	lncRNA	-	-
ENST00000722389.1	FAM27C-261	1287	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722383.1	FAM27C-255	1275	No protein	-	lncRNA	-	-
ENST00000722362.1	FAM27C-234	1250	No protein	-	lncRNA	-	-
ENST00000670686.1	FAM27C-226	1228	No protein	-	lncRNA	-	-
ENST00000662964.2	FAM27C-222	1207	No protein	-	lncRNA	-	-
ENST00000722360.1	FAM27C-232	1159	No protein	-	lncRNA	-	-
ENST00000722385.1	FAM27C-257	1142	No protein	-	lncRNA	-	-
ENST00000651201.1	FAM27C-209	1139	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722363.1	FAM27C-235	1134	No protein	-	lncRNA	-	-
ENST00000722364.1	FAM27C-236	1084	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722394.1	FAM27C-266	1083	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722377.1	FAM27C-249	1026	No protein	-	lncRNA	-	-
ENST00000722393.1	FAM27C-265	1009	No protein	-	lncRNA	-	-
ENST00000722356.1	FAM27C-228	1006	No protein	-	lncRNA	-	-
ENST00000722369.1	FAM27C-241	990	No protein	-	lncRNA	-	-
ENST00000722370.1	FAM27C-242	931	No protein	-	lncRNA	-	-
ENST00000722391.1	FAM27C-263	919	No protein	-	lncRNA	-	-
ENST00000722371.1	FAM27C-243	910	No protein	-	lncRNA	-	-
ENST00000722375.1	FAM27C-247	892	No protein	-	lncRNA	-	-
ENST00000417850.1	FAM27C-203	891	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000722388.1	FAM27C-260	823	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000722357.1	FAM27C-229	802	No protein	-	lncRNA	-	-
ENST00000722372.1	FAM27C-244	801	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000377542.4	FAM27C-201	780	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000439760.1	FAM27C-205	747	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000722373.1	FAM27C-245	730	No protein	-	lncRNA	-	-
ENST00000722395.1	FAM27C-267	718	No protein	-	lncRNA	-	-
ENST00000722386.1	FAM27C-258	710	No protein	-	lncRNA	-	-
ENST00000722367.1	FAM27C-239	708	No protein	-	lncRNA	-	-
ENST00000722366.1	FAM27C-238	701	No protein	-	lncRNA	-	-
ENST00000722368.1	FAM27C-240	701	No protein	-	lncRNA	-	-
ENST00000722374.1	FAM27C-246	697	No protein	-	lncRNA	-	-
ENST00000722398.1	FAM27C-270	666	No protein	-	lncRNA	-	-
ENST00000722387.1	FAM27C-259	653	No protein	-	lncRNA	-	-
ENST00000722384.1	FAM27C-256	649	No protein	-	lncRNA	-	-
ENST00000722381.1	FAM27C-253	644	No protein	-	lncRNA	-	-
ENST00000657353.2	FAM27C-219	623	No protein	-	lncRNA	-	-
ENST00000722400.1	FAM27C-272	607	No protein	-	lncRNA	-	-
ENST00000722365.1	FAM27C-237	602	No protein	-	lncRNA	-	-
ENST00000399894.6	FAM27C-202	579	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000722399.1	FAM27C-271	568	No protein	-	lncRNA	-	-
ENST00000722376.1	FAM27C-248	558	No protein	-	lncRNA	-	-
ENST00000722390.1	FAM27C-262	555	No protein	-	lncRNA	-	-
ENST00000722397.1	FAM27C-269	553	No protein	-	lncRNA	-	-
ENST00000722392.1	FAM27C-264	515	No protein	-	lncRNA	-	-
ENST00000722380.1	FAM27C-252	506	No protein	-	lncRNA	-	-
ENST00000722614.1	FAM27C-275	504	No protein	-	lncRNA	-	-
ENST00000421848.1	FAM27C-204	492	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000722379.1	FAM27C-251	459	No protein	-	lncRNA	-	-
ENST00000722401.1	FAM27C-273	398	No protein	-	lncRNA	-	-
ENST00000722378.1	FAM27C-250	386	No protein	-	lncRNA	-	-
ENST00000722402.1	FAM27C-274	352	No protein	-	lncRNA	-	-
ENST00000722396.1	FAM27C-268	348	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,379 bps,

Version

ENST00000669747.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000669747.1 FAM27C-224

Summary

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Transcript: ENST00000669747.1 FAM27C-224

Summary

About Us

Get help

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